Gene: CRU_005G19820 (Capsella rubella)

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Gene Identifier
CRU_005G19820
Transcript Identifier
CRU_005G19820.1
Gene Type
Coding gene
Location
scaffold_5 : 10349702-10353205 : positive

Family

Gene family
HOM03D000026
(2090 genes in 31 species)
specific family
Subfamily
ORTHO03D000755
(68 genes in 19 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable peptide/nitrate transporter
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10018737m.g
idPAC:20885852

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006857IEAGenome Projectoligopeptide transport
GO:0055085IEAGenome Projecttransmembrane transport
GO:0006810IEAInterProtransport
GO:0009624ISOPLAZA Tree-based Orthologyresponse to nematodeAT1G72140
GO:0042886IEAPLAZA Homologyamide transportHOM03D000026
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000026
GO:0071705IEAPLAZA Homologynitrogen compound transportHOM03D000026
GO:0015833IEAPLAZA Homologypeptide transportHOM03D000026
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000026
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000026
GO:0071702IEAPLAZA Homologyorganic substance transportHOM03D000026
GO:0051179IEAPLAZA HomologylocalizationHOM03D000026

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215IEAGenome Projecttransporter activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0016021IEAGenome Projectintegral to membrane
GO:0005774ISOPLAZA Tree-based Orthologyvacuolar membraneAT1G72140

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018456PTR2 family proton/oligopeptide symporter, conserved site
IPR000109Proton-dependent oligopeptide transporter family
IPR016196Major facilitator superfamily domain, general substrate transporter

Mapman id Description
34.13transport.peptides and oligopeptides
No SignalP domains detected for this gene.