Gene: CRU_005G19630 (Capsella rubella)

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Gene Identifier
CRU_005G19630
Transcript Identifier
CRU_005G19630.1
Gene Type
Coding gene
Location
scaffold_5 : 10268205-10279600 : positive

Family

Gene family
HOM03D000113
(850 genes in 31 species)
specific family
Subfamily
ORTHO03D011637
(22 genes in 20 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
TATA-binding protein-associated factor 172
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10016556m.g
idPAC:20886455

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1902185ISOPLAZA Integrative Orthologypositive regulation of shoot apical meristem developmentAT3G54280

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0005524IEAGenome ProjectATP binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004386IEAGenome Projecthelicase activity
GO:0016817IEAGenome Projecthydrolase activity, acting on acid anhydrides
GO:0005488IEAInterProbinding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000113
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000113
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000113
GO:0043167IEAPLAZA Homologyion bindingHOM03D000113
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000113
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000113
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000113
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000113
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000113
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000113
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000113
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000113
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000113
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000113
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000113
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000113
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000113
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000113
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000113
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000113
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000113
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000113

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001650Helicase, C-terminal
IPR022707Domain of unknown function DUF3535
IPR016024Armadillo-type fold
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011989Armadillo-like helical
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR000330SNF2-related

Mapman id Description
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
No SignalP domains detected for this gene.