Gene: CRU_005G19290 (Capsella rubella)

Overview top

Gene Identifier
CRU_005G19290
Transcript Identifier
CRU_005G19290.1
Gene Type
Coding gene
Location
scaffold_5 : 10138857-10141394 : positive

Family

Gene family
HOM03D002360
(75 genes in 31 species)
specific family
Subfamily
ORTHO03D001886
(45 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine)
Aspartate--tRNA ligase, cytoplasmic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10017054m.g
idPAC:20886396

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006422IEAInterProaspartyl-tRNA aminoacylation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G31180 AT4G26870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004815IEAInterProaspartate-tRNA ligase activity
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D002360

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G26870
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G31180 AT4G26870

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004523Aspartyl-tRNA synthetases
IPR006195Aminoacyl-tRNA synthetase, class II
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR012340Nucleic acid-binding, OB-fold
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like

Mapman id Description
29.1.12protein.aa activation.aspartate-tRNA ligase
No SignalP domains detected for this gene.