Gene: CRU_005G19020 (Capsella rubella)

Overview top

Gene Identifier
CRU_005G19020
Transcript Identifier
CRU_005G19020.1
Gene Type
Coding gene
Location
scaffold_5 : 10046925-10047329 : positive

Family

Gene family
HOM03D000368
(335 genes in 31 species)
specific family
Subfamily
ORTHO03D012935
(18 genes in 8 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Histone H2B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10018224m.g
idPAC:20887024

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334IEAGenome Projectnucleosome assembly
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000368
GO:0071824IEAPLAZA Homologyprotein-DNA complex subunit organizationHOM03D000368
GO:0071822IEAPLAZA Homologyprotein complex subunit organizationHOM03D000368
GO:0006325IEAPLAZA Homologychromatin organizationHOM03D000368
GO:0006323IEAPLAZA HomologyDNA packagingHOM03D000368
GO:0070271IEAPLAZA Homologyprotein complex biogenesisHOM03D000368
GO:0043933IEAPLAZA Homologymacromolecular complex subunit organizationHOM03D000368
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000368
GO:0031497IEAPLAZA Homologychromatin assemblyHOM03D000368
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000368
GO:0006996IEAPLAZA Homologyorganelle organizationHOM03D000368
GO:0071103IEAPLAZA HomologyDNA conformation changeHOM03D000368
GO:0065003IEAPLAZA Homologymacromolecular complex assemblyHOM03D000368
GO:0065004IEAPLAZA Homologyprotein-DNA complex assemblyHOM03D000368
GO:0006333IEAPLAZA Homologychromatin assembly or disassemblyHOM03D000368
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000368
GO:0016043IEAPLAZA Homologycellular component organizationHOM03D000368
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000368
GO:0051276IEAPLAZA Homologychromosome organizationHOM03D000368
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000368
GO:0044085IEAPLAZA Homologycellular component biogenesisHOM03D000368
GO:0022607IEAPLAZA Homologycellular component assemblyHOM03D000368
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03D000368
GO:0071840IEAPLAZA Homologycellular component organization or biogenesisHOM03D000368
GO:0034622IEAPLAZA Homologycellular macromolecular complex assemblyHOM03D000368
GO:0006259IEAPLAZA HomologyDNA metabolic processHOM03D000368
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000368
GO:0006461IEAPLAZA Homologyprotein complex assemblyHOM03D000368

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03D000368
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000368

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000786IEAGenome Projectnucleosome
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03D000368
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03D000368
GO:0032993IEAPLAZA Homologyprotein-DNA complexHOM03D000368
GO:0043226IEAPLAZA HomologyorganelleHOM03D000368
GO:0043228IEAPLAZA Homologynon-membrane-bounded organelleHOM03D000368
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000368
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03D000368
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D000368
GO:0000785IEAPLAZA HomologychromatinHOM03D000368
GO:0044815IEAPLAZA HomologyDNA packaging complexHOM03D000368
GO:0005694IEAPLAZA HomologychromosomeHOM03D000368
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000368
GO:0043232IEAPLAZA Homologyintracellular non-membrane-bounded organelleHOM03D000368
GO:0044427IEAPLAZA Homologychromosomal partHOM03D000368
GO:0044422IEAPLAZA Homologyorganelle partHOM03D000368
GO:0044446IEAPLAZA Homologyintracellular organelle partHOM03D000368

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000558Histone H2B
IPR009072Histone-fold
IPR007125Histone core

Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.