Gene: CRU_005G18890 (Capsella rubella)

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Gene Identifier
CRU_005G18890
Transcript Identifier
CRU_005G18890.1
Gene Type
Coding gene
Location
scaffold_5 : 9996940-9999471 : positive

Family

Gene family
HOM03D000656
(209 genes in 31 species)
specific family
Subfamily
ORTHO03D000354
(98 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
glucuronic acid decarboxylase 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10019457m.g
idPAC:20887641

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006694IEAGenome Projectsteroid biosynthetic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0044237IEAGenome Projectcellular metabolic process
GO:0045226IEAGenome Projectextracellular polysaccharide biosynthetic process
GO:0042732ISOPLAZA Integrative OrthologyD-xylose metabolic processAT3G53520

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003854IEAGenome Project3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0016616IEAGenome Projectoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0003824IEAGenome Projectcatalytic activity
GO:0050662IEAGenome Projectcoenzyme binding
GO:0008831IEAGenome ProjectdTDP-4-dehydrorhamnose reductase activity
GO:0048037IEAPLAZA Homologycofactor bindingHOM03D000656
GO:0048040ISOPLAZA Integrative OrthologyUDP-glucuronate decarboxylase activityAT3G53520

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020ISOPLAZA Integrative OrthologymembraneAT3G53520
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT3G53520
GO:0005768ISOPLAZA Integrative OrthologyendosomeAT3G53520
GO:0005802ISOPLAZA Integrative Orthologytrans-Golgi networkAT3G53520

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016040NAD(P)-binding domain
IPR001509NAD-dependent epimerase/dehydratase

Mapman id Description
10.1.5cell wall.precursor synthesis.UXS
No SignalP domains detected for this gene.