Gene: CRU_005G10730 (Capsella rubella)

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Gene Identifier
CRU_005G10730
Transcript Identifier
CRU_005G10730.1
Gene Type
Coding gene
Location
scaffold_5 : 6707659-6710532 : positive

Family

Gene family
HOM03D000074
(1202 genes in 31 species)
specific family
Subfamily
ORTHO03D000242
(118 genes in 25 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10018691m.g
idPAC:20886664

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process
GO:0080167ISOPLAZA Tree-based Orthologyresponse to karrikinAT1G60090
GO:0046283ISOPLAZA Tree-based Orthologyanthocyanin-containing compound metabolic processAT4G27830
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000074
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000074
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000074

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553IEAGenome Projecthydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824IEAInterProcatalytic activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000074
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000074

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773ISOPLAZA Tree-based OrthologyvacuoleAT4G27830 AT3G62750
GO:0005777ISOPLAZA Tree-based OrthologyperoxisomeAT4G27820

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001360Glycoside hydrolase, family 1
IPR013781Glycoside hydrolase, catalytic domain
IPR017853Glycoside hydrolase, superfamily
IPR018120Glycoside hydrolase, family 1, active site

Mapman id Description
26.3misc.gluco-, galacto- and mannosidases
No SignalP domains detected for this gene.