Gene: CRU_005G05720 (Capsella rubella)

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Gene Identifier
CRU_005G05720
Transcript Identifier
CRU_005G05720.1
Gene Type
Coding gene
Location
scaffold_5 : 2560327-2561359 : positive

Family

Gene family
HOM03D000132
(752 genes in 31 species)
specific family
Subfamily
ORTHO03D000955
(61 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
b binding protein of LHCII type I, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10017751m.g
idPAC:20887299

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009765IEAGenome Projectphotosynthesis, light harvesting
GO:0010218ISOPLAZA Tree-based Orthologyresponse to far red lightAT2G05100 AT3G27690
GO:0010114ISOPLAZA Tree-based Orthologyresponse to red lightAT2G05100 AT3G27690
GO:0009637ISOPLAZA Tree-based Orthologyresponse to blue lightAT2G05100 AT3G27690
GO:0015979IEAPLAZA HomologyphotosynthesisHOM03D000132
GO:0009987IEAPLAZA Homologycellular processHOM03D000132
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000132
GO:0006091IEAPLAZA Homologygeneration of precursor metabolites and energyHOM03D000132
GO:0019684IEAPLAZA Homologyphotosynthesis, light reactionHOM03D000132
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000132

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0005774ISOPLAZA Tree-based Orthologyvacuolar membraneAT2G05070
GO:0010287ISOPLAZA Tree-based OrthologyplastoglobuleAT2G05070 AT2G05100
GO:0009535ISOPLAZA Tree-based Orthologychloroplast thylakoid membraneAT2G05070 AT2G05100 AT3G27690
GO:0009941ISOPLAZA Tree-based Orthologychloroplast envelopeAT2G05070 AT2G05100 AT3G27690

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR022796Chlorophyll A-B binding protein
IPR023329Chlorophyll a/b binding protein domain
IPR001344Chlorophyll A-B binding protein, plant

Mapman id Description
1.1.1.1PS.lightreaction.photosystem II.LHC-II
No SignalP domains detected for this gene.