Gene: CRU_005G01480 (Capsella rubella)

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Gene Identifier
CRU_005G01480
Transcript Identifier
CRU_005G01480.1
Gene Type
Coding gene
Location
scaffold_5 : 634732-636621 : positive

Family

Gene family
HOM03D000134
(744 genes in 26 species)
specific family
Subfamily
ORTHO03D013332
(17 genes in 4 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10018732m.g
idPAC:20885708

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0035556IEAInterProintracellular signal transduction
GO:0010200ISOPLAZA Tree-based Orthologyresponse to chitinAT4G01350
GO:0010224ISOPLAZA Tree-based Orthologyresponse to UV-BAT5G59920
GO:0009561ISOPLAZA Tree-based OrthologymegagametogenesisAT1G55420
GO:0009793ISOPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT4G10560
GO:0009409ISOPLAZA Tree-based Orthologyresponse to coldAT2G13950
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000134
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000134

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0047134IEAGenome Projectprotein-disulfide reductase activity
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0016667IEAPLAZA Homologyoxidoreductase activity, acting on a sulfur group of donorsHOM03D000134
GO:0016668IEAPLAZA Homologyoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptorHOM03D000134
GO:0016651IEAPLAZA Homologyoxidoreductase activity, acting on NAD(P)HHOM03D000134
GO:0016491IEAPLAZA Homologyoxidoreductase activityHOM03D000134

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020ISOPLAZA Tree-based OrthologymembraneAT3G13760
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT1G35610 AT5G37620 AT1G65180
GO:0009941ISOPLAZA Tree-based Orthologychloroplast envelopeAT4G13130
GO:0005634ISOPLAZA Tree-based OrthologynucleusAT2G13950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001965Zinc finger, PHD-type
IPR002219Protein kinase C-like, phorbol ester/diacylglycerol binding
IPR011424C1-like
IPR004146DC1

Mapman id Description
35.1.26not assigned.no ontology.DC1 domain containing protein
No SignalP domains detected for this gene.