Gene: CRU_005G00940 (Capsella rubella)

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Gene Identifier
CRU_005G00940
Transcript Identifier
CRU_005G00940.1
Gene Type
Coding gene
Location
scaffold_5 : 414082-418994 : positive

Family

Gene family
HOM03D001063
(142 genes in 31 species)
specific family
Subfamily
ORTHO03D017324
(9 genes in 8 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Valine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10019509m.g
idPAC:20886100

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006438IEAGenome Projectvalyl-tRNA aminoacylation
GO:0043038IEAPLAZA Homologyamino acid activationHOM03D001063
GO:0043039IEAPLAZA HomologytRNA aminoacylationHOM03D001063

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004832IEAGenome Projectvaline-tRNA ligase activity
GO:0002161IEAInterProaminoacyl-tRNA editing activity
GO:0016875IEAPLAZA Homologyligase activity, forming carbon-oxygen bondsHOM03D001063
GO:0016876IEAPLAZA Homologyligase activity, forming aminoacyl-tRNA and related compoundsHOM03D001063

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013155Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR002303Valine-tRNA ligase
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR002300Aminoacyl-tRNA synthetase, class Ia

Mapman id Description
29.1.9protein.aa activation.valine-tRNA ligase
No SignalP domains detected for this gene.