Gene: CRU_004G29030 (Capsella rubella)

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Gene Identifier
CRU_004G29030
Transcript Identifier
CRU_004G29030.1
Gene Type
Coding gene
Location
scaffold_4 : 14798723-14802990 : negative

Family

Gene family
HOM03D003040
(59 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine)
Histidine kinase CKI1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10025468m.g
idPAC:20901706

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000160IEAGenome Projectphosphorelay signal transduction system
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0007165IEAGenome Projectsignal transduction
GO:0016310IEAInterProphosphorylation
GO:0009553ISOPLAZA Integrative Orthologyembryo sac developmentAT2G47430
GO:0080117ISOPLAZA Integrative Orthologysecondary growthAT2G47430
GO:0010087ISOPLAZA Integrative Orthologyphloem or xylem histogenesisAT2G47430
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT2G47430
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D003040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEAGenome Projectphosphorelay response regulator activity
GO:0000155IEAGenome Projectphosphorelay sensor kinase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004871IEAInterProsignal transducer activity
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT2G47430
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G47430
GO:0004673ISOPLAZA Integrative Orthologyprotein histidine kinase activityAT2G47430

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT2G47430
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT2G47430

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005467Signal transduction histidine kinase, core
IPR004358Signal transduction histidine kinase-related protein, C-terminal
IPR003661Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR009082Signal transduction histidine kinase, homodimeric domain
IPR001789Signal transduction response regulator, receiver domain
IPR011006CheY-like superfamily

Mapman id Description
17.4.2hormone metabolism.cytokinin.signal transduction
No SignalP domains detected for this gene.