Gene: CRU_004G19910 (Capsella rubella)

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Gene Identifier
CRU_004G19910
Transcript Identifier
CRU_004G19910.1
Gene Type
Coding gene
Location
scaffold_4 : 11203595-11211053 : positive

Family

Gene family
HOM03D001513
(106 genes in 31 species)
specific family
Subfamily
ORTHO03D002095
(44 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
Transcription elongation factor A protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10025488m.g
idPAC:20903863

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEAGenome Projecttranscription, DNA-templated
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G38560
GO:0009845ISOPLAZA Integrative Orthologyseed germinationAT2G38560
GO:0034243ISOPLAZA Integrative Orthologyregulation of transcription elongation from RNA polymerase II promoterAT2G38560
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT2G38560
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT2G38560
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D001513

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0003677IEAPLAZA HomologyDNA bindingHOM03D001513

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003618Transcription elongation factor S-II, central domain
IPR001222Zinc finger, TFIIS-type
IPR017890Transcription elongation factor S-IIM
IPR006289Transcription elongation factor, TFIIS

Mapman id Description
29.2.4protein.synthesis.elongation
No SignalP domains detected for this gene.