Gene: CRU_004G08810 (Capsella rubella)

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Gene Identifier
CRU_004G08810
Transcript Identifier
CRU_004G08810.1
Gene Type
Coding gene
Location
scaffold_4 : 6494336-6496217 : positive

Family

Gene family
HOM03D001176
(130 genes in 30 species)
specific family
Subfamily
ORTHO03D004812
(35 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10024021m.g
idPAC:20902638

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006801IEAGenome Projectsuperoxide metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0071493ISOPLAZA Integrative Orthologycellular response to UV-BAT2G28190
GO:0071484ISOPLAZA Integrative Orthologycellular response to light intensityAT2G28190
GO:0071457ISOPLAZA Integrative Orthologycellular response to ozoneAT2G28190
GO:0019430ISOPLAZA Integrative Orthologyremoval of superoxide radicalsAT2G28190
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT2G28190
GO:0071329ISOPLAZA Integrative Orthologycellular response to sucrose stimulusAT2G28190
GO:0071472ISOPLAZA Integrative Orthologycellular response to salt stressAT2G28190
GO:0035195ISOPLAZA Integrative Orthologygene silencing by miRNAAT2G28190
GO:0034599ISOPLAZA Integrative Orthologycellular response to oxidative stressAT2G28190
GO:0010039ISOPLAZA Integrative Orthologyresponse to iron ionAT2G28190
GO:0046688ISOPLAZA Integrative Orthologyresponse to copper ionAT2G28190
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT2G28190
GO:0072593IEAPLAZA Homologyreactive oxygen species metabolic processHOM03D001176

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046872IEAGenome Projectmetal ion binding
GO:0004784IEAInterProsuperoxide dismutase activity
GO:0016721IEAPLAZA Homologyoxidoreductase activity, acting on superoxide radicals as acceptorHOM03D001176

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT2G28190
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT2G28190
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT2G28190
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT2G28190

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001424Superoxide dismutase, copper/zinc binding domain
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone
IPR018152Superoxide dismutase, copper/zinc, binding site

Mapman id Description
21.6redox.dismutases and catalases
No SignalP domains detected for this gene.