Gene: CRU_004G00730 (Capsella rubella)

Overview top

Gene Identifier
CRU_004G00730
Transcript Identifier
CRU_004G00730.1
Gene Type
Coding gene
Location
scaffold_4 : 273377-276901 : negative

Family

Gene family
HOM03D003447
(53 genes in 31 species)
specific family
Subfamily
ORTHO03D016441
(10 genes in 8 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable phenylalanine--tRNA ligase alpha subunit
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10023099m.g
idPAC:20901248

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0043039IEAGenome ProjecttRNA aminoacylation
GO:0006432IEAInterProphenylalanyl-tRNA aminoacylation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0000049IEAGenome ProjecttRNA binding
GO:0004826IEAInterProphenylalanine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT4G39280

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004529Phenylalanyl-tRNA synthetase, class IIc, alpha subunit
IPR006195Aminoacyl-tRNA synthetase, class II
IPR002319Phenylalanyl-tRNA synthetase

Mapman id Description
29.1.20protein.aa activation.phenylalanine-tRNA ligase
No SignalP domains detected for this gene.