PLAZA 3.0 Dicots gene overview : CRU_003G24200

Gene: CRU_003G24200 (Capsella rubella)

Overview

Gene Identifier: CRU_003G24200
Transcript Identifier: CRU_003G24200.1
Gene Type: Coding gene
Location: scaffold_3 : 9367027-9367771 : positive

Family

Gene family: HOM03D000965
(154 genes in 28 species)
specific family
Subfamily: ORTHO03D028011
(5 genes in 5 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Cyclin-dependent kinase inhibitor 5

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
GeneName	Carubv10014734m.g
id	PAC:20898358

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007050	IEA	Genome Project	cell cycle arrest
GO:0045736	ISO	PLAZA Integrative Orthology	negative regulation of cyclin-dependent protein serine/threonine kinase activity	AT3G24810
GO:0048519	IEA	PLAZA Homology	negative regulation of biological process	HOM03D000965
GO:0051726	IEA	PLAZA Homology	regulation of cell cycle	HOM03D000965
GO:0048523	IEA	PLAZA Homology	negative regulation of cellular process	HOM03D000965
GO:0022402	IEA	PLAZA Homology	cell cycle process	HOM03D000965
GO:0045786	IEA	PLAZA Homology	negative regulation of cell cycle	HOM03D000965
GO:0007049	IEA	PLAZA Homology	cell cycle	HOM03D000965

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004861	IEA	Genome Project	cyclin-dependent protein serine/threonine kinase inhibitor activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G24810
GO:0019207	IEA	PLAZA Homology	kinase regulator activity	HOM03D000965
GO:0019887	IEA	PLAZA Homology	protein kinase regulator activity	HOM03D000965
GO:0016538	IEA	PLAZA Homology	cyclin-dependent protein serine/threonine kinase regulator activity	HOM03D000965
GO:0004857	IEA	PLAZA Homology	enzyme inhibitor activity	HOM03D000965
GO:0019210	IEA	PLAZA Homology	kinase inhibitor activity	HOM03D000965
GO:0030291	IEA	PLAZA Homology	protein serine/threonine kinase inhibitor activity	HOM03D000965
GO:0004860	IEA	PLAZA Homology	protein kinase inhibitor activity	HOM03D000965

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA	Genome Project	nucleus

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003175	Cyclin-dependent kinase inhibitor

Mapman id	Description
31.3	cell.cycle

No SignalP domains detected for this gene.