Gene: CRU_003G20130 (Capsella rubella)

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Gene Identifier
CRU_003G20130
Transcript Identifier
CRU_003G20130.1
Gene Type
Coding gene
Location
scaffold_3 : 7598130-7602385 : negative

Family

Gene family
HOM03D000781
(179 genes in 31 species)
specific family
Subfamily
ORTHO03D001170
(56 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
oligosaccharide 1,2-alpha-mannosidase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10013330m.g
idPAC:20897710

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT3G21160
GO:0006491ISOPLAZA Integrative OrthologyN-glycan processingAT3G21160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004571IEAGenome Projectmannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509IEAGenome Projectcalcium ion binding
GO:0004559ISOPLAZA Integrative Orthologyalpha-mannosidase activityAT3G21160
GO:0015924IEAPLAZA Homologymannosyl-oligosaccharide mannosidase activityHOM03D000781
GO:0015923IEAPLAZA Homologymannosidase activityHOM03D000781
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000781
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000781

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0005768ISOPLAZA Integrative OrthologyendosomeAT3G21160
GO:0005802ISOPLAZA Integrative Orthologytrans-Golgi networkAT3G21160
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT3G21160

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001382Glycoside hydrolase, family 47

Mapman id Description
29.7.3protein.glycosylation.mannosyl-oligosaccharide alpha-1,2-mannosidase
No SignalP domains detected for this gene.