Gene: CRU_003G01380 (Capsella rubella)

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Gene Identifier
CRU_003G01380
Transcript Identifier
CRU_003G01380.1
Gene Type
Coding gene
Location
scaffold_3 : 496479-497939 : positive

Family

Gene family
HOM03D001445
(110 genes in 31 species)
specific family
Subfamily
ORTHO03D000468
(85 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10013557m.g
idPAC:20899692

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006098IEAGenome Projectpentose-phosphate shunt
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationOS06G02144
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldOS06G02144
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressOS06G02144 AT3G02360
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidOS06G02144
GO:0006739IEAPLAZA HomologyNADP metabolic processHOM03D001445
GO:0006740IEAPLAZA HomologyNADPH regenerationHOM03D001445

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004616IEAGenome Projectphosphogluconate dehydrogenase (decarboxylating) activity
GO:0050661IEAGenome ProjectNADP binding
GO:0050662IEAInterProcoenzyme binding
GO:0016491IEAInterProoxidoreductase activity
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G02360
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G02360
GO:0005777ISOPLAZA Integrative OrthologyperoxisomeAT3G02360

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013328Dehydrogenase, multihelical
IPR0089276-phosphogluconate dehydrogenase, C-terminal-like
IPR0061146-phosphogluconate dehydrogenase, C-terminal
IPR012284Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension
IPR016040NAD(P)-binding domain
IPR0061136-phosphogluconate dehydrogenase, decarboxylating
IPR0061156-phosphogluconate dehydrogenase, NADP-binding

Mapman id Description
7.1.3OPP.oxidative PP.6-phosphogluconate dehydrogenase
No SignalP domains detected for this gene.