Gene: CRU_002G21710 (Capsella rubella)

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Gene Identifier
CRU_002G21710
Transcript Identifier
CRU_002G21710.1
Gene Type
Coding gene
Location
scaffold_2 : 12209166-12210656 : negative

Family

Gene family
HOM03D003985
(47 genes in 30 species)
specific family
Subfamily
ORTHO03D003056
(39 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
pseudouridine(27/28) synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10020242m.g
idPAC:20906548

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001522IEAGenome Projectpseudouridine synthesis
GO:0009451IEAGenome ProjectRNA modification

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEAGenome ProjectRNA binding
GO:0009982IEAGenome Projectpseudouridine synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT1G20370

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020097Pseudouridine synthase I, TruA, alpha/beta domain
IPR001406Pseudouridine synthase I, TruA
IPR020094Pseudouridine synthase I, TruA, N-terminal
IPR020095Pseudouridine synthase I, TruA, C-terminal
IPR020103Pseudouridine synthase, catalytic domain

Mapman id Description
29.1.30protein.aa activation.pseudouridylate synthase
No SignalP domains detected for this gene.