Gene: CRU_002G04270 (Capsella rubella)

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Gene Identifier
CRU_002G04270
Transcript Identifier
CRU_002G04270.1
Gene Type
Coding gene
Location
scaffold_2 : 1881630-1883978 : positive

Family

Gene family
HOM03D001684
(97 genes in 30 species)
specific family
Subfamily
ORTHO03D000577
(76 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
ATP-citrate synthase subunit alpha chain protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10022108m.g
idPAC:20905036

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048366ISOPLAZA Tree-based Orthologyleaf developmentAT1G10670
GO:0045995ISOPLAZA Tree-based Orthologyregulation of embryonic developmentAT1G10670
GO:0045793ISOPLAZA Tree-based Orthologypositive regulation of cell sizeAT1G10670
GO:0043481ISOPLAZA Tree-based Orthologyanthocyanin accumulation in tissues in response to UV lightAT1G10670
GO:0019252ISOPLAZA Tree-based Orthologystarch biosynthetic processAT1G10670
GO:0016117ISOPLAZA Tree-based Orthologycarotenoid biosynthetic processAT1G10670
GO:0015995ISOPLAZA Tree-based Orthologychlorophyll biosynthetic processAT1G10670
GO:0010025ISOPLAZA Tree-based Orthologywax biosynthetic processAT1G10670
GO:0009911ISOPLAZA Tree-based Orthologypositive regulation of flower developmentAT1G10670
GO:0007568ISOPLAZA Tree-based OrthologyagingAT1G10670
GO:0006633ISOPLAZA Tree-based Orthologyfatty acid biosynthetic processAT1G10670
GO:0006085ISOPLAZA Integrative Orthologyacetyl-CoA biosynthetic processAT1G60810 AT1G10670

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAInterProATP binding
GO:0003878ISOPLAZA Tree-based OrthologyATP citrate synthase activityAT1G10670

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009346ISOPLAZA Tree-based Orthologycitrate lyase complexAT1G10670
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT1G10670

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016102Succinyl-CoA synthetase-like
IPR013650ATP-grasp fold, succinyl-CoA synthetase-type
IPR013816ATP-grasp fold, subdomain 2

Mapman id Description
8.2.11TCA / org transformation.other organic acid transformatons.atp-citrate lyase
No SignalP domains detected for this gene.