Gene: CRU_002G00650 (Capsella rubella)

Overview top

Gene Identifier
CRU_002G00650
Transcript Identifier
CRU_002G00650.1
Gene Type
Coding gene
Location
scaffold_2 : 245313-246776 : positive

Family

Gene family
HOM03D001445
(110 genes in 31 species)
specific family
Subfamily
ORTHO03D000468
(85 genes in 31 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
phosphogluconate dehydrogenase, decarboxylating
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10022193m.g
idPAC:20904586

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006098IEAGenome Projectpentose-phosphate shunt
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0006739IEAPLAZA HomologyNADP metabolic processHOM03D001445
GO:0006740IEAPLAZA HomologyNADPH regenerationHOM03D001445
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT1G64190 OS11G29400
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidOS11G29400
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldOS11G29400
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationOS11G29400

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004616IEAGenome Projectphosphogluconate dehydrogenase (decarboxylating) activity
GO:0050661IEAGenome ProjectNADP binding
GO:0050662IEAInterProcoenzyme binding
GO:0016491IEAInterProoxidoreductase activity
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G64190
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G64190
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT1G64190
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G64190
GO:0009536ISOPLAZA Integrative OrthologyplastidAT1G64190

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR0061136-phosphogluconate dehydrogenase, decarboxylating
IPR013328Dehydrogenase, multihelical
IPR016040NAD(P)-binding domain
IPR0061146-phosphogluconate dehydrogenase, C-terminal
IPR0061156-phosphogluconate dehydrogenase, NADP-binding
IPR012284Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension
IPR0089276-phosphogluconate dehydrogenase, C-terminal-like

Mapman id Description
7.1.3OPP.oxidative PP.6-phosphogluconate dehydrogenase
No SignalP domains detected for this gene.