Gene: CRU_001G35190 (Capsella rubella)
Overview 
- Gene Identifier
- CRU_001G35190
- Transcript Identifier
- CRU_001G35190.1
- Gene Type
- Coding gene
- Location
- scaffold_1 : 16379181-16404777 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
Putative vacuolar protein sorting-associated protein 13B
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
GeneName | Carubv10012395m.g |
id | PAC:20893073 |
Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0008104 | IEA | Genome Project | protein localization |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0005543 | IEA | PLAZA Homology | phospholipid binding | HOM03D000947 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G48090 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G48090 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR000008 | C2 domain |
IPR009291 | Vacuolar protein sorting-associated protein 62 |
IPR026847 | Vacuolar protein sorting-associated protein 13 |
IPR011993 | Pleckstrin homology-like domain |
IPR026854 | Vacuolar protein sorting-associated protein 13A N-terminal domain |
IPR009543 | Vacuolar protein sorting-associated protein 13 domain |
Mapman id | Description |
---|---|
35.1.19 | not assigned.no ontology.C2 domain-containing protein |
No SignalP domains detected for this gene.