Gene: CRU_001G29440 (Capsella rubella)

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Gene Identifier
CRU_001G29440
Transcript Identifier
CRU_001G29440.1
Gene Type
Coding gene
Location
scaffold_1 : 11406331-11410702 : negative

Family

Gene family
HOM03D000026
(2090 genes in 31 species)
specific family
Subfamily
ORTHO03D000239
(118 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Putative peptide/nitrate transporter At5g19640
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10008608m.g
idPAC:20893319

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006857IEAGenome Projectoligopeptide transport
GO:0055085IEAGenome Projecttransmembrane transport
GO:0006810IEAInterProtransport
GO:0015706ISOPLAZA Integrative Orthologynitrate transportAT1G32450
GO:0042128ISOPLAZA Integrative Orthologynitrate assimilationAT1G32450
GO:0010167ISOPLAZA Integrative Orthologyresponse to nitrateAT1G32450
GO:0042886IEAPLAZA Homologyamide transportHOM03D000026
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000026
GO:0071705IEAPLAZA Homologynitrogen compound transportHOM03D000026
GO:0015833IEAPLAZA Homologypeptide transportHOM03D000026
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000026
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000026
GO:0071702IEAPLAZA Homologyorganic substance transportHOM03D000026
GO:0051179IEAPLAZA HomologylocalizationHOM03D000026

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215IEAGenome Projecttransporter activity
GO:0015112ISOPLAZA Integrative Orthologynitrate transmembrane transporter activityAT1G32450

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0016021IEAGenome Projectintegral to membrane
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G32450

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016196Major facilitator superfamily domain, general substrate transporter
IPR000109Proton-dependent oligopeptide transporter family

Mapman id Description
34.13transport.peptides and oligopeptides
No SignalP domains detected for this gene.