Gene: CRU_001G26960 (Capsella rubella)

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Gene Identifier
CRU_001G26960
Transcript Identifier
CRU_001G26960.1
Gene Type
Coding gene
Location
scaffold_1 : 10256140-10256943 : negative

Family

Gene family
HOM03D000132
(752 genes in 31 species)
specific family
Subfamily
ORTHO03D000323
(101 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
b binding protein of LHCII type I, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10010022m.g
idPAC:20892017

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009765IEAGenome Projectphotosynthesis, light harvesting
GO:0009750ISOPLAZA Integrative Orthologyresponse to fructoseAT1G29930 AT1G29920 AT1G29910
GO:0010114ISOPLAZA Integrative Orthologyresponse to red lightAT1G29930 AT1G29920 AT1G29910
GO:0010218ISOPLAZA Integrative Orthologyresponse to far red lightAT1G29930 AT1G29920 AT1G29910
GO:0009637ISOPLAZA Integrative Orthologyresponse to blue lightAT1G29930 AT1G29920 AT1G29910
GO:0009769ISOPLAZA Tree-based Orthologyphotosynthesis, light harvesting in photosystem IIAT2G34420 AT2G34430
GO:0015979IEAPLAZA HomologyphotosynthesisHOM03D000132
GO:0009987IEAPLAZA Homologycellular processHOM03D000132
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000132
GO:0006091IEAPLAZA Homologygeneration of precursor metabolites and energyHOM03D000132
GO:0019684IEAPLAZA Homologyphotosynthesis, light reactionHOM03D000132
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000132

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016168ISOPLAZA Integrative Orthologychlorophyll bindingAT1G29930 AT1G29920 AT1G29910 AT2G34420 AT2G34430

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0010287ISOPLAZA Integrative OrthologyplastoglobuleAT1G29930 AT1G29920 AT1G29910 AT2G34420 AT2G34430
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT1G29930 AT1G29920 AT1G29910
GO:0009534ISOPLAZA Integrative Orthologychloroplast thylakoidAT1G29930 AT1G29910
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT1G29930 AT1G29920 AT1G29910
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT1G29930 AT1G29920 AT1G29910
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G29930 AT1G29920 AT1G29910
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT1G29930 AT1G29920 AT1G29910 AT2G34420 AT2G34430
GO:0009941ISOPLAZA Tree-based Orthologychloroplast envelopeAT2G34430

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001344Chlorophyll A-B binding protein, plant
IPR023329Chlorophyll a/b binding protein domain
IPR022796Chlorophyll A-B binding protein

Mapman id Description
1.1.1.1PS.lightreaction.photosystem II.LHC-II
No SignalP domains detected for this gene.