Gene: CRU_001G24090 (Capsella rubella)

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Gene Identifier
CRU_001G24090
Transcript Identifier
CRU_001G24090.1
Gene Type
Coding gene
Location
scaffold_1 : 9053798-9054817 : positive

Family

Gene family
HOM03D000366
(335 genes in 30 species)
specific family
Subfamily
ORTHO03D048241
(3 genes in 3 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
isopentenyltransferase 6, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10011273m.g
idPAC:20891489

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008033IEAGenome ProjecttRNA processing
GO:0009058IEAGenome Projectbiosynthetic process
GO:0009691ISOPLAZA Integrative Orthologycytokinin biosynthetic processAT1G25410 AT1G68460 AT4G24650 AT3G19160
GO:0080117ISOPLAZA Tree-based Orthologysecondary growthAT1G68460
GO:0010467IEAPLAZA Homologygene expressionHOM03D000366
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000366
GO:0034470IEAPLAZA HomologyncRNA processingHOM03D000366
GO:0006396IEAPLAZA HomologyRNA processingHOM03D000366
GO:0006399IEAPLAZA HomologytRNA metabolic processHOM03D000366
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000366
GO:0034660IEAPLAZA HomologyncRNA metabolic processHOM03D000366
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000366

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0004161IEAGenome Projectdimethylallyltranstransferase activity
GO:0052623ISOPLAZA Tree-based OrthologyADP dimethylallyltransferase activityAT1G68460 AT4G24650
GO:0052622ISOPLAZA Tree-based OrthologyATP dimethylallyltransferase activityAT1G68460 AT4G24650
GO:0009824ISOPLAZA Tree-based OrthologyAMP dimethylallyltransferase activityAT1G68460 AT4G24650
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000366
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000366
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000366

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT4G24650
GO:0009536ISOPLAZA Tree-based OrthologyplastidAT1G68460

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR002627tRNA isopentenyltransferase

Mapman id Description
17.4.1hormone metabolism.cytokinin.synthesis-degradation
No SignalP domains detected for this gene.