Gene: CRU_001G23390 (Capsella rubella)

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Gene Identifier
CRU_001G23390
Transcript Identifier
CRU_001G23390.1
Gene Type
Coding gene
Location
scaffold_1 : 8764021-8765520 : negative

Family

Gene family
HOM03D001313
(118 genes in 30 species)
specific family
Subfamily
ORTHO03D010712
(25 genes in 22 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Vesicle transport v-SNARE 12
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10010242m.g
idPAC:20892370

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006886IEAGenome Projectintracellular protein transport
GO:0016192IEAInterProvesicle-mediated transport
GO:0006623ISOPLAZA Integrative Orthologyprotein targeting to vacuoleAT1G26670
GO:0046907ISOPLAZA Integrative Orthologyintracellular transportAT1G26670
GO:0006891ISOPLAZA Integrative Orthologyintra-Golgi vesicle-mediated transportAT1G26670

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G26670
GO:0005483ISOPLAZA Integrative Orthologysoluble NSF attachment protein activityAT1G26670
GO:0004872ISOPLAZA Integrative Orthologyreceptor activityAT1G26670
GO:0000149ISOPLAZA Integrative OrthologySNARE bindingAT1G26670

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0005768ISOPLAZA Integrative OrthologyendosomeAT1G26670
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT1G26670
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G26670
GO:0005770ISOPLAZA Integrative Orthologylate endosomeAT1G26670
GO:0005802ISOPLAZA Integrative Orthologytrans-Golgi networkAT1G26670

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010989t-SNARE
IPR007705Vesicle transport v-SNARE, N-terminal

Mapman id Description
31.4cell.vesicle transport
No SignalP domains detected for this gene.