Gene: CRU_001G21100 (Capsella rubella)

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Gene Identifier
CRU_001G21100
Transcript Identifier
CRU_001G21100.1
Gene Type
Coding gene
Location
scaffold_1 : 7936560-7937708 : positive

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D024738
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
H2 finger protein ATL11
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10012585m.g
idPAC:20891432

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0033591ISOPLAZA Integrative Orthologyresponse to L-ascorbic acidAT1G22500
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT1G22500
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT1G22500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT1G22500
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
SignalP Description
SignalP-TMSignal Peptide detected using TM network