Gene: CRU_001G17110 (Capsella rubella)

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Gene Identifier
CRU_001G17110
Transcript Identifier
CRU_001G17110.1
Gene Type
Coding gene
Location
scaffold_1 : 6297015-6307033 : negative

Family

Gene family
HOM03D004667
(43 genes in 29 species)
specific family
Subfamily
ORTHO03D007556
(31 genes in 28 species)
specific family

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Descriptions

Description (AnnoMine)
phospho-5-dehydro-2-deoxy-D-gluconate aldolase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10011390m.g
idPAC:20889116

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process
GO:0006098IEAGenome Projectpentose-phosphate shunt
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0006573IEAInterProvaline metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0016832IEAGenome Projectaldehyde-lyase activity
GO:0004616IEAGenome Projectphosphogluconate dehydrogenase (decarboxylating) activity
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0050662IEAInterProcoenzyme binding
GO:0008442IEAInterPro3-hydroxyisobutyrate dehydrogenase activity
GO:0003824IEAInterProcatalytic activity
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G18270

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR0061156-phosphogluconate dehydrogenase, NADP-binding
IPR000771Ketose-bisphosphate aldolase, class-II
IPR010737Protein of unknown function, DUF1537
IPR016040NAD(P)-binding domain
IPR013328Dehydrogenase, multihelical
IPR015815Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type
IPR0089276-phosphogluconate dehydrogenase, C-terminal-like
IPR013785Aldolase-type TIM barrel
IPR0022043-hydroxyisobutyrate dehydrogenase-related, conserved site

Mapman id Description
7.1.3OPP.oxidative PP.6-phosphogluconate dehydrogenase
No SignalP domains detected for this gene.