Gene: CRU_001G06440 (Capsella rubella)

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Gene Identifier
CRU_001G06440
Transcript Identifier
CRU_001G06440.1
Gene Type
Coding gene
Location
scaffold_1 : 2378361-2382166 : positive

Family

Gene family
HOM03D000022
(2181 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
metalloprotease FTSH
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10008328m.g
idPAC:20892199

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAGenome Projectproteolysis

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0004222IEAGenome Projectmetalloendopeptidase activity
GO:0008270IEAGenome Projectzinc ion binding
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000022
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000022
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000022
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000022
GO:0043167IEAPLAZA Homologyion bindingHOM03D000022
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000022
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000022
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000022
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000022
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000022
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000022
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000022
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000022
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000022
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000022
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000022
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000022
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000022
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000022
GO:0005488IEAPLAZA HomologybindingHOM03D000022
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000022
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000022
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000022

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAGenome Projectintegral to membrane
GO:0016020IEAInterPromembrane

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003960ATPase, AAA-type, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005936Peptidase, FtsH
IPR003593AAA+ ATPase domain
IPR000642Peptidase M41
IPR011546Peptidase M41, FtsH extracellular
IPR003959ATPase, AAA-type, core

Mapman id Description
29.5.7protein.degradation.metalloprotease
No SignalP domains detected for this gene.