Gene: CRU_001G04840 (Capsella rubella)

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Gene Identifier
CRU_001G04840
Transcript Identifier
CRU_001G04840.1
Gene Type
Coding gene
Location
scaffold_1 : 1823760-1824937 : positive

Family

Gene family
HOM03D000037
(1691 genes in 31 species)
specific family
Subfamily
ORTHO03D026326
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Ras-related protein Rab
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10010263m.g
idPAC:20889923

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007264IEAGenome Projectsmall GTPase mediated signal transduction
GO:0006184IEAInterProGTP catabolic process
GO:0007165IEAInterProsignal transduction
GO:0015031IEAInterProprotein transport
GO:0006886IEAInterProintracellular protein transport
GO:0006913IEAInterPronucleocytoplasmic transport
GO:0009203IEAPLAZA Homologyribonucleoside triphosphate catabolic processHOM03D000037
GO:0009205IEAPLAZA Homologypurine ribonucleoside triphosphate metabolic processHOM03D000037
GO:0009207IEAPLAZA Homologypurine ribonucleoside triphosphate catabolic processHOM03D000037
GO:0046128IEAPLAZA Homologypurine ribonucleoside metabolic processHOM03D000037
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000037
GO:0006753IEAPLAZA Homologynucleoside phosphate metabolic processHOM03D000037
GO:0046130IEAPLAZA Homologypurine ribonucleoside catabolic processHOM03D000037
GO:0006152IEAPLAZA Homologypurine nucleoside catabolic processHOM03D000037
GO:0042454IEAPLAZA Homologyribonucleoside catabolic processHOM03D000037
GO:0051169IEAPLAZA Homologynuclear transportHOM03D000037
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000037
GO:0033036IEAPLAZA Homologymacromolecule localizationHOM03D000037
GO:0019439IEAPLAZA Homologyaromatic compound catabolic processHOM03D000037
GO:0046700IEAPLAZA Homologyheterocycle catabolic processHOM03D000037
GO:0009987IEAPLAZA Homologycellular processHOM03D000037
GO:0023052IEAPLAZA HomologysignalingHOM03D000037
GO:1901292IEAPLAZA Homologynucleoside phosphate catabolic processHOM03D000037
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000037
GO:0019637IEAPLAZA Homologyorganophosphate metabolic processHOM03D000037
GO:0051179IEAPLAZA HomologylocalizationHOM03D000037
GO:0019693IEAPLAZA Homologyribose phosphate metabolic processHOM03D000037
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000037
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000037
GO:1901069IEAPLAZA Homologyguanosine-containing compound catabolic processHOM03D000037
GO:1901068IEAPLAZA Homologyguanosine-containing compound metabolic processHOM03D000037
GO:0044281IEAPLAZA Homologysmall molecule metabolic processHOM03D000037
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000037
GO:0009261IEAPLAZA Homologyribonucleotide catabolic processHOM03D000037
GO:0042278IEAPLAZA Homologypurine nucleoside metabolic processHOM03D000037
GO:1901565IEAPLAZA Homologyorganonitrogen compound catabolic processHOM03D000037
GO:1901564IEAPLAZA Homologyorganonitrogen compound metabolic processHOM03D000037
GO:0070727IEAPLAZA Homologycellular macromolecule localizationHOM03D000037
GO:0009199IEAPLAZA Homologyribonucleoside triphosphate metabolic processHOM03D000037
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000037
GO:0055086IEAPLAZA Homologynucleobase-containing small molecule metabolic processHOM03D000037
GO:0046907IEAPLAZA Homologyintracellular transportHOM03D000037
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000037
GO:1901361IEAPLAZA Homologyorganic cyclic compound catabolic processHOM03D000037
GO:0034655IEAPLAZA Homologynucleobase-containing compound catabolic processHOM03D000037
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000037
GO:0072521IEAPLAZA Homologypurine-containing compound metabolic processHOM03D000037
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000037
GO:0072523IEAPLAZA Homologypurine-containing compound catabolic processHOM03D000037
GO:0009116IEAPLAZA Homologynucleoside metabolic processHOM03D000037
GO:0044700IEAPLAZA Homologysingle organism signalingHOM03D000037
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000037
GO:0009119IEAPLAZA Homologyribonucleoside metabolic processHOM03D000037
GO:0071702IEAPLAZA Homologyorganic substance transportHOM03D000037
GO:0009259IEAPLAZA Homologyribonucleotide metabolic processHOM03D000037
GO:0006163IEAPLAZA Homologypurine nucleotide metabolic processHOM03D000037
GO:0009117IEAPLAZA Homologynucleotide metabolic processHOM03D000037
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000037
GO:0051716IEAPLAZA Homologycellular response to stimulusHOM03D000037
GO:0009146IEAPLAZA Homologypurine nucleoside triphosphate catabolic processHOM03D000037
GO:0009144IEAPLAZA Homologypurine nucleoside triphosphate metabolic processHOM03D000037
GO:0009143IEAPLAZA Homologynucleoside triphosphate catabolic processHOM03D000037
GO:0006796IEAPLAZA Homologyphosphate-containing compound metabolic processHOM03D000037
GO:0009141IEAPLAZA Homologynucleoside triphosphate metabolic processHOM03D000037
GO:0046434IEAPLAZA Homologyorganophosphate catabolic processHOM03D000037
GO:0006793IEAPLAZA Homologyphosphorus metabolic processHOM03D000037
GO:0051641IEAPLAZA Homologycellular localizationHOM03D000037
GO:0006195IEAPLAZA Homologypurine nucleotide catabolic processHOM03D000037
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000037
GO:0044712IEAPLAZA Homologysingle-organism catabolic processHOM03D000037
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000037
GO:0016482IEAPLAZA Homologycytoplasmic transportHOM03D000037
GO:0006810IEAPLAZA HomologytransportHOM03D000037
GO:0051649IEAPLAZA Homologyestablishment of localization in cellHOM03D000037
GO:0044270IEAPLAZA Homologycellular nitrogen compound catabolic processHOM03D000037
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000037
GO:1901657IEAPLAZA Homologyglycosyl compound metabolic processHOM03D000037
GO:1901658IEAPLAZA Homologyglycosyl compound catabolic processHOM03D000037
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000037
GO:0009166IEAPLAZA Homologynucleotide catabolic processHOM03D000037
GO:0045184IEAPLAZA Homologyestablishment of protein localizationHOM03D000037
GO:0009164IEAPLAZA Homologynucleoside catabolic processHOM03D000037
GO:0035556IEAPLAZA Homologyintracellular signal transductionHOM03D000037
GO:0008104IEAPLAZA Homologyprotein localizationHOM03D000037
GO:0007154IEAPLAZA Homologycell communicationHOM03D000037
GO:0046039IEAPLAZA HomologyGTP metabolic processHOM03D000037
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000037
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000037
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000037
GO:0009150IEAPLAZA Homologypurine ribonucleotide metabolic processHOM03D000037
GO:1901136IEAPLAZA Homologycarbohydrate derivative catabolic processHOM03D000037
GO:1901135IEAPLAZA Homologycarbohydrate derivative metabolic processHOM03D000037
GO:0009154IEAPLAZA Homologypurine ribonucleotide catabolic processHOM03D000037
GO:0034613IEAPLAZA Homologycellular protein localizationHOM03D000037
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000037
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03D000037

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924IEAGenome ProjectGTPase activity
GO:0005525IEAGenome ProjectGTP binding
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000037
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000037
GO:0043167IEAPLAZA Homologyion bindingHOM03D000037
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000037
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000037
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000037
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000037
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000037
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000037
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000037
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000037
GO:0019001IEAPLAZA Homologyguanyl nucleotide bindingHOM03D000037
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000037
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000037
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000037
GO:0032561IEAPLAZA Homologyguanyl ribonucleotide bindingHOM03D000037
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000037
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000037
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000037
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000037
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000037
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000037
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000037
GO:0005488IEAPLAZA HomologybindingHOM03D000037
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000037

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0016020IEAInterPromembrane
GO:0005623IEAPLAZA HomologycellHOM03D000037
GO:0044464IEAPLAZA Homologycell partHOM03D000037

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020849Small GTPase superfamily, Ras type
IPR001806Small GTPase superfamily
IPR005225Small GTP-binding protein domain
IPR003578Small GTPase superfamily, Rho type
IPR002041Ran GTPase
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003579Small GTPase superfamily, Rab type

Mapman id Description
30.5signalling.G-proteins
No SignalP domains detected for this gene.