PLAZA 3.0 Dicots gene overview : CR10G04430

Gene: CR10G04430 (Chlamydomonas reinhardtii)

Overview

Gene Identifier: CR10G04430
Transcript Identifier: CR10G04430.1
Gene Type: Coding gene
Location: chromosome_10 : 2685612-2694787 : negative

Family

Gene family: HOM03D023213
(2 genes in 2 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine): Alpha-mannosidase 2C1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Cre10.g437950.t1.2
id	PAC:27579679

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0006013	IEA	InterPro	mannose metabolic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0030246	IEA	InterPro	carbohydrate binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0015923	IEA	InterPro	mannosidase activity
GO:0003824	IEA	InterPro	catalytic activity
GO:0004559	IEA	InterPro	alpha-mannosidase activity
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR015341	Glycoside hydrolase, family 38, central domain
IPR000602	Glycoside hydrolase family 38, N-terminal domain
IPR011013	Galactose mutarotase-like domain
IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682	Glycosyl hydrolase family 38, C-terminal
IPR027291	Glycoside hydrolase 38/57, N-terminal domain

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.