PLAZA 3.0 Dicots gene overview : CR01G02270

Gene: CR01G02270 (Chlamydomonas reinhardtii)

Overview

Gene Identifier: CR01G02270
Transcript Identifier: CR01G02270.1
Gene Type: Coding gene
Location: chromosome_1 : 1787333-1793131 : positive

Family

Gene family: HOM03D000142
(728 genes in 31 species)
specific family
Duplication type: Tandem duplicate

Loading...please wait

Descriptions

Description (AnnoMine): AP2-like ethylene-responsive transcription factor

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Cre01.g009650.t1.2
id	PAC:27578821

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006355	IEA	InterPro	regulation of transcription, DNA-dependent
GO:0010077	ISO	PLAZA Integrative Orthology	maintenance of inflorescence meristem identity	OS07G13170
GO:0010022	ISO	PLAZA Integrative Orthology	meristem determinacy	OS07G13170
GO:0010092	ISO	PLAZA Integrative Orthology	specification of organ identity	OS07G13170
GO:0048506	ISO	PLAZA Integrative Orthology	regulation of timing of meristematic phase transition	OS07G13170
GO:0009887	ISO	PLAZA Integrative Orthology	organ morphogenesis	AT5G17430 AT4G37750 AT2G28550
GO:0007276	ISO	PLAZA Integrative Orthology	gamete generation	AT4G37750
GO:0010492	ISO	PLAZA Integrative Orthology	maintenance of shoot apical meristem identity	AT4G37750
GO:0042127	ISO	PLAZA Integrative Orthology	regulation of cell proliferation	AT4G37750
GO:0030154	ISO	PLAZA Integrative Orthology	cell differentiation	AT4G36920
GO:0019953	ISO	PLAZA Integrative Orthology	sexual reproduction	AT4G36920
GO:0009908	ISO	PLAZA Integrative Orthology	flower development	AT4G36920
GO:0048481	ISO	PLAZA Integrative Orthology	ovule development	AT4G36920
GO:0010073	ISO	PLAZA Integrative Orthology	meristem maintenance	AT4G36920
GO:0010093	ISO	PLAZA Integrative Orthology	specification of floral organ identity	AT4G36920
GO:0048316	ISO	PLAZA Integrative Orthology	seed development	AT4G36920
GO:0051302	ISO	PLAZA Integrative Orthology	regulation of cell division	AT3G20840
GO:0048364	ISO	PLAZA Integrative Orthology	root development	AT3G20840
GO:0007389	ISO	PLAZA Integrative Orthology	pattern specification process	AT3G20840
GO:0019827	ISO	PLAZA Integrative Orthology	stem cell maintenance	AT3G20840
GO:0010228	ISO	PLAZA Integrative Orthology	vegetative to reproductive phase transition of meristem	AT2G28550
GO:1901959	ISO	PLAZA Integrative Orthology	positive regulation of cutin biosynthetic process	AT1G79700 AT1G16060
GO:0045723	ISO	PLAZA Integrative Orthology	positive regulation of fatty acid biosynthetic process	AT1G79700 AT1G16060
GO:0040008	ISO	PLAZA Integrative Orthology	regulation of growth	AT1G16060
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT1G16060
GO:0010187	ISO	PLAZA Integrative Orthology	negative regulation of seed germination	AT1G16060
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT1G16060
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT1G16060
GO:0010468	IEA	PLAZA Homology	regulation of gene expression	HOM03D000142
GO:0006807	IEA	PLAZA Homology	nitrogen compound metabolic process	HOM03D000142
GO:0010467	IEA	PLAZA Homology	gene expression	HOM03D000142
GO:0051252	IEA	PLAZA Homology	regulation of RNA metabolic process	HOM03D000142
GO:0051171	IEA	PLAZA Homology	regulation of nitrogen compound metabolic process	HOM03D000142
GO:0044260	IEA	PLAZA Homology	cellular macromolecule metabolic process	HOM03D000142
GO:0019222	IEA	PLAZA Homology	regulation of metabolic process	HOM03D000142
GO:0019219	IEA	PLAZA Homology	regulation of nucleobase-containing compound metabolic process	HOM03D000142
GO:0034641	IEA	PLAZA Homology	cellular nitrogen compound metabolic process	HOM03D000142
GO:0034645	IEA	PLAZA Homology	cellular macromolecule biosynthetic process	HOM03D000142
GO:0050789	IEA	PLAZA Homology	regulation of biological process	HOM03D000142
GO:0009889	IEA	PLAZA Homology	regulation of biosynthetic process	HOM03D000142
GO:0018130	IEA	PLAZA Homology	heterocycle biosynthetic process	HOM03D000142
GO:0019438	IEA	PLAZA Homology	aromatic compound biosynthetic process	HOM03D000142
GO:0043170	IEA	PLAZA Homology	macromolecule metabolic process	HOM03D000142
GO:0046483	IEA	PLAZA Homology	heterocycle metabolic process	HOM03D000142
GO:0016070	IEA	PLAZA Homology	RNA metabolic process	HOM03D000142
GO:0009987	IEA	PLAZA Homology	cellular process	HOM03D000142
GO:0044271	IEA	PLAZA Homology	cellular nitrogen compound biosynthetic process	HOM03D000142
GO:0065007	IEA	PLAZA Homology	biological regulation	HOM03D000142
GO:0010556	IEA	PLAZA Homology	regulation of macromolecule biosynthetic process	HOM03D000142
GO:0006139	IEA	PLAZA Homology	nucleobase-containing compound metabolic process	HOM03D000142
GO:0032774	IEA	PLAZA Homology	RNA biosynthetic process	HOM03D000142
GO:0006725	IEA	PLAZA Homology	cellular aromatic compound metabolic process	HOM03D000142
GO:1901576	IEA	PLAZA Homology	organic substance biosynthetic process	HOM03D000142
GO:0090304	IEA	PLAZA Homology	nucleic acid metabolic process	HOM03D000142
GO:0080090	IEA	PLAZA Homology	regulation of primary metabolic process	HOM03D000142
GO:2001141	IEA	PLAZA Homology	regulation of RNA biosynthetic process	HOM03D000142
GO:0044237	IEA	PLAZA Homology	cellular metabolic process	HOM03D000142
GO:0044238	IEA	PLAZA Homology	primary metabolic process	HOM03D000142
GO:0009058	IEA	PLAZA Homology	biosynthetic process	HOM03D000142
GO:0009059	IEA	PLAZA Homology	macromolecule biosynthetic process	HOM03D000142
GO:2000112	IEA	PLAZA Homology	regulation of cellular macromolecule biosynthetic process	HOM03D000142
GO:0006351	IEA	PLAZA Homology	transcription, DNA-templated	HOM03D000142
GO:0060255	IEA	PLAZA Homology	regulation of macromolecule metabolic process	HOM03D000142
GO:0031323	IEA	PLAZA Homology	regulation of cellular metabolic process	HOM03D000142
GO:0031326	IEA	PLAZA Homology	regulation of cellular biosynthetic process	HOM03D000142
GO:1901360	IEA	PLAZA Homology	organic cyclic compound metabolic process	HOM03D000142
GO:1901362	IEA	PLAZA Homology	organic cyclic compound biosynthetic process	HOM03D000142
GO:0034654	IEA	PLAZA Homology	nucleobase-containing compound biosynthetic process	HOM03D000142
GO:0050794	IEA	PLAZA Homology	regulation of cellular process	HOM03D000142
GO:0008152	IEA	PLAZA Homology	metabolic process	HOM03D000142
GO:0071704	IEA	PLAZA Homology	organic substance metabolic process	HOM03D000142
GO:0044249	IEA	PLAZA Homology	cellular biosynthetic process	HOM03D000142

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003700	IEA	InterPro	sequence-specific DNA binding transcription factor activity
GO:0003677	IEA	InterPro	DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G60120
GO:0000981	ISO	PLAZA Integrative Orthology	sequence-specific DNA binding RNA polymerase II transcription factor activity	AT1G79700 AT1G16060
GO:0097159	IEA	PLAZA Homology	organic cyclic compound binding	HOM03D000142
GO:0003676	IEA	PLAZA Homology	nucleic acid binding	HOM03D000142
GO:1901363	IEA	PLAZA Homology	heterocyclic compound binding	HOM03D000142
GO:0001071	IEA	PLAZA Homology	nucleic acid binding transcription factor activity	HOM03D000142

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	OS07G13170 AT5G67180 AT5G17430 AT4G37750 AT4G36920 AT3G20840 AT2G28550 AT1G79700 AT1G16060

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001471	AP2/ERF domain
IPR016177	DNA-binding domain

Mapman id	Description
27.3.3	RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family

No SignalP domains detected for this gene.

Database	Type
PlnTFDB	AP2-EREBP
PlantTFDB	AP2