Gene: CP00333G00020 (Carica papaya)

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Gene Identifier
CP00333G00020
Transcript Identifier
CP00333G00020.1
Gene Type
Coding gene
Location
supercontig_333 : 8913-9989 : positive

Family

Gene family
HOM03D003375
(54 genes in 28 species)
specific family
Subfamily
ORTHO03D055355
(2 genes in 2 species)
specific family

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Descriptions

Description (AnnoMine)
rough sheath 2 homolog
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_333.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009615ISOPLAZA Integrative Orthologyresponse to virusAT2G37630
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT2G37630
GO:0050832ISOPLAZA Integrative Orthologydefense response to fungusAT2G37630
GO:0045088ISOPLAZA Integrative Orthologyregulation of innate immune responseAT2G37630
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT2G37630
GO:0009944ISOPLAZA Integrative Orthologypolarity specification of adaxial/abaxial axisAT2G37630
GO:0010338ISOPLAZA Integrative Orthologyleaf formationAT2G37630
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT2G37630
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT2G37630
GO:0009751ISOPLAZA Integrative Orthologyresponse to salicylic acidAT2G37630
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G37630
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT2G37630
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT2G37630
GO:0008356ISOPLAZA Integrative Orthologyasymmetric cell divisionAT2G37630
GO:0009965ISOPLAZA Integrative Orthologyleaf morphogenesisAT2G37630

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003682IEAInterProchromatin binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G37630
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT2G37630

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT2G37630
GO:0000793ISOPLAZA Integrative Orthologycondensed chromosomeAT2G37630
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G37630

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR009057Homeodomain-like
IPR017930Myb domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMYB