Gene: CP00311G00040 (Carica papaya)

Overview top

Gene Identifier
CP00311G00040
Transcript Identifier
CP00311G00040.1
Gene Type
Coding gene
Location
supercontig_311 : 21732-26028 : negative

Family

Gene family
HOM03D002185
(79 genes in 28 species)
specific family
Subfamily
ORTHO03D014165
(15 genes in 14 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
CHD3-type chromatin-remodeling factor PICKLE
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_311.4

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006333IEAGenome Projectchromatin assembly or disassembly
GO:0006344ISOPLAZA Integrative Orthologymaintenance of chromatin silencingAT1G08060
GO:0032259ISOPLAZA Integrative OrthologymethylationAT1G08060
GO:0006342ISOPLAZA Integrative Orthologychromatin silencingAT1G08060

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0005515IEAGenome Projectprotein binding
GO:0005524IEAGenome ProjectATP binding
GO:0003682IEAGenome Projectchromatin binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT1G08060
GO:0004386IEAPLAZA Homologyhelicase activityHOM03D002185
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D002185

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000785IEAGenome Projectchromatin

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR023780Chromo domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR016197Chromo domain-like
IPR000330SNF2-related
IPR000953Chromo domain/shadow
IPR001965Zinc finger, PHD-type

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSNF2