Gene: CP00196G00010 (Carica papaya)

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Gene Identifier
CP00196G00010
Transcript Identifier
CP00196G00010.1
Gene Type
Coding gene
Location
supercontig_196 : 9359-9886 : positive

Family

Gene family
HOM03D000218
(474 genes in 31 species)
specific family
Subfamily
ORTHO03D011820
(22 genes in 19 species)
specific family

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Descriptions

Description (AnnoMine)
transcription factor Y subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_196.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000218
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000218
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000218
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000218
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000218
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000218
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000218
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000218
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000218
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000218
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000218
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000218
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000218
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000218
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000218
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000218

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D000218
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03D000218
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000218
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000218
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000218

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0005622IEAGenome Projectintracellular
GO:0044464IEAPLAZA Homologycell partHOM03D000218
GO:0005623IEAPLAZA HomologycellHOM03D000218

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009072Histone-fold
IPR003956Transcription factor, NFYB/HAP3, conserved site
IPR003957Transcription factor, NFYB/HAP3 subunit
IPR003958Transcription factor CBF/NF-Y/archaeal histone

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT