PLAZA 3.0 Dicots gene overview : CP00117G00270

Gene: CP00117G00270 (Carica papaya)

Overview

Gene Identifier: CP00117G00270
Transcript Identifier: CP00117G00270.1
Gene Type: Coding gene
Location: supercontig_117 : 276313-278193 : negative

Family

Gene family: HOM03D000923
(158 genes in 31 species)
specific family
Subfamily: ORTHO03D017596
(9 genes in 7 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Acyl carrier protein 3, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_117.27

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006633	IEA	Genome Project	fatty acid biosynthetic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0031177	IEA	Genome Project	phosphopantetheine binding
GO:0048037	IEA	Genome Project	cofactor binding
GO:0000036	IEA	Genome Project	ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT3G05020
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT3G05020 AT1G54630 AT1G54580
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT1G54630

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006162	Phosphopantetheine attachment site
IPR009081	Acyl carrier protein-like
IPR003231	Acyl carrier protein (ACP)
IPR020806	Polyketide synthase, phosphopantetheine-binding domain

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.