PLAZA 3.0 Dicots gene overview : CP00107G00670

Gene: CP00107G00670 (Carica papaya)

Overview

Gene Identifier: CP00107G00670
Transcript Identifier: CP00107G00670.1
Gene Type: Coding gene
Location: supercontig_107 : 364838-367509 : positive

Family

Gene family: HOM03D000319
(368 genes in 31 species)
specific family
Subfamily: ORTHO03D010261
(26 genes in 24 species)
specific family

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Descriptions

Description (AnnoMine): Prolyl 4-hydroxylase subunit alpha-1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_107.67

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	Genome Project	oxidation-reduction process
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03D000319

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016705	IEA	Genome Project	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	IEA	Genome Project	iron ion binding
GO:0031418	IEA	Genome Project	L-ascorbic acid binding
GO:0031406	IEA	PLAZA Homology	carboxylic acid binding	HOM03D000319
GO:0043177	IEA	PLAZA Homology	organic acid binding	HOM03D000319
GO:0043168	IEA	PLAZA Homology	anion binding	HOM03D000319
GO:0043169	IEA	PLAZA Homology	cation binding	HOM03D000319
GO:0046914	IEA	PLAZA Homology	transition metal ion binding	HOM03D000319
GO:0051213	IEA	PLAZA Homology	dioxygenase activity	HOM03D000319
GO:0019842	IEA	PLAZA Homology	vitamin binding	HOM03D000319
GO:0046872	IEA	PLAZA Homology	metal ion binding	HOM03D000319
GO:0016491	IEA	PLAZA Homology	oxidoreductase activity	HOM03D000319
GO:0016706	IEA	PLAZA Homology	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	HOM03D000319
GO:0030246	IEA	PLAZA Homology	carbohydrate binding	HOM03D000319
GO:0048029	IEA	PLAZA Homology	monosaccharide binding	HOM03D000319

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003582	ShKT domain
IPR006620	Prolyl 4-hydroxylase, alpha subunit

No MapMan annotations defined for this gene.

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network