PLAZA 3.0 Dicots gene overview : CP00081G00690

Gene: CP00081G00690 (Carica papaya)

Overview

Gene Identifier: CP00081G00690
Transcript Identifier: CP00081G00690.1
Gene Type: Coding gene
Location: supercontig_81 : 286671-288132 : positive

Family

Gene family: HOM03D000246
(437 genes in 31 species)
specific family
Subfamily: ORTHO03D000125
(162 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine): Elongation factor 1 alpha

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_81.69

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006414	IEA	Genome Project	translational elongation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003746	IEA	Genome Project	translation elongation factor activity
GO:0005525	IEA	Genome Project	GTP binding
GO:0003924	IEA	Genome Project	GTPase activity
GO:0032555	IEA	PLAZA Homology	purine ribonucleotide binding	HOM03D000246
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03D000246
GO:0032553	IEA	PLAZA Homology	ribonucleotide binding	HOM03D000246
GO:0043168	IEA	PLAZA Homology	anion binding	HOM03D000246
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03D000246
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03D000246
GO:0000166	IEA	PLAZA Homology	nucleotide binding	HOM03D000246
GO:0032561	IEA	PLAZA Homology	guanyl ribonucleotide binding	HOM03D000246
GO:0036094	IEA	PLAZA Homology	small molecule binding	HOM03D000246
GO:0001883	IEA	PLAZA Homology	purine nucleoside binding	HOM03D000246
GO:0008135	IEA	PLAZA Homology	translation factor activity, nucleic acid binding	HOM03D000246
GO:0097367	IEA	PLAZA Homology	carbohydrate derivative binding	HOM03D000246
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03D000246
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03D000246
GO:0001882	IEA	PLAZA Homology	nucleoside binding	HOM03D000246
GO:0017076	IEA	PLAZA Homology	purine nucleotide binding	HOM03D000246
GO:0017111	IEA	PLAZA Homology	nucleoside-triphosphatase activity	HOM03D000246
GO:0032549	IEA	PLAZA Homology	ribonucleoside binding	HOM03D000246
GO:0019001	IEA	PLAZA Homology	guanyl nucleotide binding	HOM03D000246
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03D000246
GO:0032550	IEA	PLAZA Homology	purine ribonucleoside binding	HOM03D000246

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	Genome Project	cytoplasm
GO:0005622	IEA	PLAZA Homology	intracellular	HOM03D000246

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009000	Translation protein, beta-barrel domain
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal
IPR000795	Elongation factor, GTP-binding domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR004161	Translation elongation factor EFTu/EF1A, domain 2
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR004539	Translation elongation factor EF1A, eukaryotic/archaeal

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.