Gene: CP00044G01260 (Carica papaya)

Overview top

Gene Identifier
CP00044G01260
Transcript Identifier
CP00044G01260.1
Gene Type
Coding gene
Location
supercontig_44 : 1576568-1580162 : negative

Family

Gene family
HOM03D001735
(95 genes in 30 species)
specific family
Subfamily
ORTHO03D005743
(33 genes in 30 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
Meiotic recombination protein DMC1 homolog
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_44.126

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006259IEAGenome ProjectDNA metabolic process
GO:0007131IEAGenome Projectreciprocal meiotic recombination
GO:0051026ISOPLAZA Integrative Orthologychiasma assemblyAT3G22880
GO:0006281ISOPLAZA Integrative OrthologyDNA repairOS11G04954 OS12G04980
GO:0007126ISOPLAZA Integrative OrthologymeiosisAT3G22880
GO:0000733ISOPLAZA Integrative OrthologyDNA strand renaturationOS11G04954 OS12G04980
GO:0000724ISOPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationOS11G04954 OS12G04980
GO:0000707ISOPLAZA Integrative Orthologymeiotic DNA recombinase assemblyOS11G04954 OS12G04980
GO:0006310ISOPLAZA Integrative OrthologyDNA recombinationOS11G04954 OS12G04980
GO:0051321ISOPLAZA Integrative Orthologymeiotic cell cycleOS11G04954 OS12G04980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0005524IEAGenome ProjectATP binding
GO:0005515IEAGenome Projectprotein binding
GO:0000166IEAGenome Projectnucleotide binding
GO:0008094IEAGenome ProjectDNA-dependent ATPase activity
GO:0003684ISOPLAZA Integrative Orthologydamaged DNA bindingOS11G04954 OS12G04980

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helical
IPR020587DNA recombination/repair protein RecA, monomer-monomer interface
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR013632DNA recombination and repair protein Rad51, C-terminal
IPR020588DNA recombination/repair protein RecA-like, ATP-binding domain
IPR011940Meiotic recombinase Dmc1

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.