Gene: CM00006G01730 (Cucumis melo)

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Gene Identifier
CM00006G01730
Transcript Identifier
CM00006G01730.1
Gene Type
Coding gene
Location
CM3.5_scaffold00006 : 1006530-1011086 : negative

Family

Gene family
HOM03D000270
(417 genes in 30 species)
specific family
Subfamily
ORTHO03D000236
(119 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable polygalacturonase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameMELO3C006092
idMELO3C006092T1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAInterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650IEAInterPropolygalacturonase activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000270
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000270
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000270

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618ISOPLAZA Integrative Orthologycell wallAT4G23500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006626Parallel beta-helix repeat
IPR011050Pectin lyase fold/virulence factor
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.