Gene: CM00006G00470 (Cucumis melo)

Overview top

Gene Identifier
CM00006G00470
Transcript Identifier
CM00006G00470.1
Gene Type
Coding gene
Location
CM3.5_scaffold00006 : 299087-309550 : positive

Family

Gene family
HOM03D002033
(84 genes in 31 species)
specific family
Subfamily
ORTHO03D013341
(17 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
protein ligase BRE1-like 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameMELO3C005971
idMELO3C005971T1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009817ISOPLAZA Integrative Orthologydefense response to fungus, incompatible interactionAT2G44950
GO:0033523ISOPLAZA Integrative Orthologyhistone H2B ubiquitinationAT2G44950
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT2G44950
GO:0048505ISOPLAZA Integrative Orthologyregulation of timing of cell differentiationAT2G44950
GO:0051301ISOPLAZA Integrative Orthologycell divisionAT2G44950
GO:0016049ISOPLAZA Integrative Orthologycell growthAT2G44950
GO:0010389ISOPLAZA Integrative Orthologyregulation of G2/M transition of mitotic cell cycleAT2G44950
GO:0006513ISOPLAZA Integrative Orthologyprotein monoubiquitinationAT2G44950
GO:0009965ISOPLAZA Integrative Orthologyleaf morphogenesisAT2G44950
GO:0010390ISOPLAZA Integrative Orthologyhistone monoubiquitinationAT2G44950
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT2G44950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT2G44950
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G44950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT2G44950
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G44950

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR017907Zinc finger, RING-type, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.