Gene: CM00005G03840 (Cucumis melo)

Overview top

Gene Identifier
CM00005G03840
Transcript Identifier
CM00005G03840.1
Gene Type
Coding gene
Location
CM3.5_scaffold00005 : 4969275-4971851 : positive

Family

Gene family
HOM03D005890
(37 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
transcription factor IIH subunit 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameMELO3C005421
idMELO3C005421T1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0006289IEAInterPronucleotide-excision repair
GO:0006351IEAInterProtranscription, DNA-templated
GO:0006357ISOPLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoterAT1G05055

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000439IEAInterProcore TFIIH complex
GO:0005675ISOPLAZA Integrative Orthologyholo TFIIH complexAT1G05055
GO:0000441IEAPLAZA HomologySSL2-core TFIIH complexHOM03D005890
GO:0032806IEAPLAZA Homologycarboxy-terminal domain protein kinase complexHOM03D005890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004595TFIIH C1-like domain
IPR007198Ssl1-like
IPR007087Zinc finger, C2H2
IPR002035von Willebrand factor, type A
IPR012170TFIIH subunit Ssl1/p44

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.