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WorkbenchGene: CM00005G01970 (Cucumis melo)
Overview 
- Gene Identifier
- CM00005G01970
- Transcript Identifier
- CM00005G01970.1
- Gene Type
- Coding gene
- Location
- CM3.5_scaffold00005 : 2975239-2978760 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
protein ligase RIE1
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| GeneName | MELO3C005253 |
| id | MELO3C005253T1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0009790 | ISO | PLAZA Integrative Orthology | embryo development | AT2G01735 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0043169 | IEA | PLAZA Homology | cation binding | HOM03D000318 |
| GO:0046914 | IEA | PLAZA Homology | transition metal ion binding | HOM03D000318 |
| GO:0046872 | IEA | PLAZA Homology | metal ion binding | HOM03D000318 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G68070 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.