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WorkbenchGene: CM00004G04140 (Cucumis melo)
Overview 
- Gene Identifier
- CM00004G04140
- Transcript Identifier
- CM00004G04140.1
- Gene Type
- Coding gene
- Location
- CM3.5_scaffold00004 : 9119214-9122622 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
Leucine--tRNA ligase, cytoplasmic
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| GeneName | MELO3C005060 |
| id | MELO3C005060T3 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006429 | IEA | InterPro | leucyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0002161 | IEA | InterPro | aminoacyl-tRNA editing activity | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004823 | IEA | InterPro | leucine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G09620 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G09620 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G09620 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| InterPro | Description |
|---|---|
| IPR009008 | Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR013155 | Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding |
| IPR002300 | Aminoacyl-tRNA synthetase, class Ia |
| IPR001412 | Aminoacyl-tRNA synthetase, class I, conserved site |
| IPR004493 | Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic |
| IPR009080 | Aminoacyl-tRNA synthetase, class 1a, anticodon-binding |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.