Gene: CM00001G00460 (Cucumis melo)

Overview top

Gene Identifier
CM00001G00460
Transcript Identifier
CM00001G00460.1
Gene Type
Coding gene
Location
CM3.5_scaffold00001 : 333564-339598 : negative

Family

Gene family
HOM03D000215
(477 genes in 30 species)
specific family
Subfamily
ORTHO03D000111
(170 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Protein argonaute
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameMELO3C001957
idMELO3C001957T1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0019827ISOPLAZA Integrative Orthologystem cell maintenanceOS06G39640
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentOS06G39640
GO:0007143ISOPLAZA Integrative Orthologyfemale meiosisOS03G58600
GO:0033169ISOPLAZA Integrative Orthologyhistone H3-K9 demethylationOS03G58600
GO:0055046ISOPLAZA Integrative OrthologymicrogametogenesisOS03G58600
GO:0007140ISOPLAZA Integrative Orthologymale meiosisOS03G58600
GO:0009561ISOPLAZA Integrative OrthologymegagametogenesisOS03G58600
GO:1902183ISOPLAZA Integrative Orthologyregulation of shoot apical meristem developmentAT5G43810
GO:0010586ISOPLAZA Integrative OrthologymiRNA metabolic processAT5G43810
GO:0035019ISOPLAZA Integrative Orthologysomatic stem cell maintenanceAT5G43810
GO:0010599ISOPLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interferenceAT1G69440
GO:0035196ISOPLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNAAT1G69440
GO:0010267ISOPLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interferenceAT1G69440
GO:0040034ISOPLAZA Integrative Orthologyregulation of development, heterochronicAT1G69440
GO:0010050ISOPLAZA Integrative Orthologyvegetative phase changeAT1G69440
GO:0035195ISOPLAZA Integrative Orthologygene silencing by miRNAAT1G69440 AT1G48410
GO:0016246ISOPLAZA Integrative OrthologyRNA interferenceAT1G69440 AT1G48410
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G48410
GO:0009965ISOPLAZA Integrative Orthologyleaf morphogenesisAT1G48410
GO:0010589ISOPLAZA Integrative Orthologyleaf proximal/distal pattern formationAT1G48410
GO:0009955ISOPLAZA Integrative Orthologyadaxial/abaxial pattern specificationAT1G48410
GO:0010305ISOPLAZA Integrative Orthologyleaf vascular tissue pattern formationAT1G48410
GO:0045087ISOPLAZA Integrative Orthologyinnate immune responseAT1G48410
GO:0048864ISOPLAZA Integrative Orthologystem cell developmentAT1G48410
GO:0009616ISOPLAZA Integrative Orthologyvirus induced gene silencingAT1G48410
GO:0048830ISOPLAZA Integrative Orthologyadventitious root developmentAT1G48410
GO:0009850ISOPLAZA Integrative Orthologyauxin metabolic processAT1G48410
GO:0010218ISOPLAZA Integrative Orthologyresponse to far red lightAT1G48410
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT1G48410
GO:0016441ISOPLAZA Integrative Orthologyposttranscriptional gene silencingAT1G48410

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0003676IEAInterPronucleic acid binding
GO:0035198ISOPLAZA Integrative OrthologymiRNA bindingAT5G43810 AT1G48410
GO:0035197ISOPLAZA Integrative OrthologysiRNA bindingAT1G48410
GO:0004521ISOPLAZA Integrative Orthologyendoribonuclease activityAT1G48410

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmOS06G39640 AT1G69440 AT1G48410
GO:0005731ISOPLAZA Integrative Orthologynucleolus organizer regionOS03G58600
GO:0005730ISOPLAZA Integrative OrthologynucleolusOS03G58600
GO:0019898ISOPLAZA Integrative Orthologyextrinsic to membraneAT1G48410
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G48410
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G48410

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003165Stem cell self-renewal protein Piwi
IPR003100Argonaute/Dicer protein, PAZ domain
IPR024357Argonaut, glycine-rich domain
IPR014811Domain of unknown function DUF1785
IPR012337Ribonuclease H-like domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.