PLAZA 3.0 Dicots gene overview : CL06G08030

Gene: CL06G08030 (Citrullus lanatus)

Overview

Gene Identifier: CL06G08030
Transcript Identifier: CL06G08030.1
Gene Type: Coding gene
Location: Chr6 : 10263581-10268386 : positive

Family

Gene family: HOM03D001051
(143 genes in 31 species)
specific family
Subfamily: ORTHO03D015858
(11 genes in 10 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description (AnnoMine): Methionine--tRNA ligase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
GeneName	Cla010568

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006431	IEA	InterPro	methionyl-tRNA aminoacylation
GO:0006418	IEA	InterPro	tRNA aminoacylation for protein translation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0000049	IEA	InterPro	tRNA binding
GO:0000166	IEA	InterPro	nucleotide binding
GO:0004825	IEA	InterPro	methionine-tRNA ligase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0004812	IEA	InterPro	aminoacyl-tRNA ligase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	InterPro	cytoplasm

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR014758	Methionyl-tRNA synthetase
IPR002547	tRNA-binding domain
IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR015413	Methionyl/Leucyl tRNA synthetase
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR012340	Nucleic acid-binding, OB-fold

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.