PLAZA 3.0 Dicots gene overview : CL05G23900

Gene: CL05G23900 (Citrullus lanatus)

Overview

Gene Identifier: CL05G23900
Transcript Identifier: CL05G23900.1
Gene Type: Coding gene
Location: Chr5 : 30282579-30293066 : positive

Family

Gene family: HOM03D000355
(343 genes in 31 species)
specific family
Subfamily: ORTHO03D002020
(44 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine): protein kinase PRP4 homolog

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
GeneName	Cla020385

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006468	IEA	InterPro	protein phosphorylation
GO:0006796	IEA	PLAZA Homology	phosphate-containing compound metabolic process	HOM03D000355
GO:0006793	IEA	PLAZA Homology	phosphorus metabolic process	HOM03D000355
GO:0016310	IEA	PLAZA Homology	phosphorylation	HOM03D000355
GO:0043412	IEA	PLAZA Homology	macromolecule modification	HOM03D000355
GO:0036211	IEA	PLAZA Homology	protein modification process	HOM03D000355
GO:0006464	IEA	PLAZA Homology	cellular protein modification process	HOM03D000355

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004672	IEA	InterPro	protein kinase activity
GO:0004674	IEA	InterPro	protein serine/threonine kinase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0016772	IEA	InterPro	transferase activity, transferring phosphorus-containing groups
GO:0016301	IEA	PLAZA Homology	kinase activity	HOM03D000355
GO:0016773	IEA	PLAZA Homology	phosphotransferase activity, alcohol group as acceptor	HOM03D000355

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G53640 AT3G25840 AT1G13350
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G13350

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain
IPR011009	Protein kinase-like domain
IPR000719	Protein kinase domain
IPR008271	Serine/threonine-protein kinase, active site

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.