PLAZA 3.0 Dicots gene overview : CL05G19750

Gene: CL05G19750 (Citrullus lanatus)

Overview

Gene Identifier: CL05G19750
Transcript Identifier: CL05G19750.1
Gene Type: Coding gene
Location: Chr5 : 26657346-26665386 : negative

Family

Gene family: HOM03D002546
(71 genes in 31 species)
specific family
Subfamily: ORTHO03D010818
(25 genes in 23 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): GTPase Obg

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
GeneName	Cla020800

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding
GO:0000287	IEA	InterPro	magnesium ion binding
GO:0003924	IEA	InterPro	GTPase activity
GO:0005525	IEA	InterPro	GTP binding

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006595	CTLH, C-terminal LisH motif
IPR006594	LisH dimerisation motif
IPR024964	CTLH/CRA C-terminal to LisH motif domain
IPR006074	GTP1/OBG, conserved site
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR014100	GTP-binding protein Obg/CgtA
IPR006169	GTP1/OBG domain
IPR013144	CRA domain
IPR006073	GTP binding domain

No MapMan annotations defined for this gene.

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network