Gene: CL02G03090 (Citrullus lanatus)

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Gene Identifier
CL02G03090
Transcript Identifier
CL02G03090.1
Gene Type
Coding gene
Location
Chr2 : 2857065-2861304 : negative

Family

Gene family
HOM03D000868
(165 genes in 31 species)
specific family
Subfamily
ORTHO03D000474
(84 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable histone deacetylase 1-B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCla015713

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016575IEAInterProhistone deacetylation
GO:0009405ISOPLAZA Tree-based OrthologypathogenesisAT4G38130
GO:0009294ISOPLAZA Tree-based OrthologyDNA mediated transformationAT4G38130
GO:0016573ISOPLAZA Tree-based Orthologyhistone acetylationAT4G38130
GO:0045892ISOPLAZA Tree-based Orthologynegative regulation of transcription, DNA-dependentAT4G38130
GO:0009861ISOPLAZA Tree-based Orthologyjasmonic acid and ethylene-dependent systemic resistanceAT4G38130
GO:2000026ISOPLAZA Tree-based Orthologyregulation of multicellular organismal developmentAT4G38130
GO:0051276IEAPLAZA Homologychromosome organizationHOM03D000868
GO:0006325IEAPLAZA Homologychromatin organizationHOM03D000868
GO:0006476IEAPLAZA Homologyprotein deacetylationHOM03D000868
GO:0035601IEAPLAZA Homologyprotein deacylationHOM03D000868
GO:0016570IEAPLAZA Homologyhistone modificationHOM03D000868
GO:0016569IEAPLAZA Homologycovalent chromatin modificationHOM03D000868
GO:0016568IEAPLAZA Homologychromatin modificationHOM03D000868

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004407IEAInterProhistone deacetylase activity
GO:0005515ISOPLAZA Tree-based Orthologyprotein bindingAT4G38130
GO:0016810IEAPLAZA Homologyhydrolase activity, acting on carbon-nitrogen (but not peptide) bondsHOM03D000868
GO:0016811IEAPLAZA Homologyhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidesHOM03D000868
GO:0019213IEAPLAZA Homologydeacetylase activityHOM03D000868
GO:0033558IEAPLAZA Homologyprotein deacetylase activityHOM03D000868

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Tree-based OrthologynucleusAT4G38130

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003084Histone deacetylase
IPR000286Histone deacetylase superfamily
IPR023801Histone deacetylase domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.