Gene: CL01G20560 (Citrullus lanatus)

Overview top

Gene Identifier
CL01G20560
Transcript Identifier
CL01G20560.1
Gene Type
Coding gene
Location
Chr1 : 29845631-29848902 : positive

Family

Gene family
HOM03D000253
(431 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
alpha type-7
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCla014298

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEAInterProubiquitin-dependent protein catabolic process
GO:0051603IEAInterProproteolysis involved in cellular protein catabolic process
GO:0009700ISOPLAZA Integrative Orthologyindole phytoalexin biosynthetic processAT3G51260
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT3G51260
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03D000253
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000253
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03D000253
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03D000253
GO:0006508IEAPLAZA HomologyproteolysisHOM03D000253
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03D000253
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000253
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000253
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03D000253
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000253
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000253
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000253

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004175IEAInterProendopeptidase activity
GO:0004298IEAInterProthreonine-type endopeptidase activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT3G51260
GO:0070003IEAPLAZA Homologythreonine-type peptidase activityHOM03D000253
GO:0070011IEAPLAZA Homologypeptidase activity, acting on L-amino acid peptidesHOM03D000253
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000253
GO:0008233IEAPLAZA Homologypeptidase activityHOM03D000253

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005839IEAInterProproteasome core complex
GO:0019773IEAInterProproteasome core complex, alpha-subunit complex
GO:0000502ISOPLAZA Integrative Orthologyproteasome complexAT5G66140 AT3G51260
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT5G66140 AT3G51260
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G66140 AT3G51260
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G51260
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT3G51260
GO:0022626ISOPLAZA Integrative Orthologycytosolic ribosomeAT3G51260
GO:0009524ISOPLAZA Integrative OrthologyphragmoplastAT3G51260
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G51260
GO:0005819ISOPLAZA Integrative OrthologyspindleAT3G51260
GO:0005622IEAPLAZA HomologyintracellularHOM03D000253
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000253
GO:0005623IEAPLAZA HomologycellHOM03D000253
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000253
GO:0044464IEAPLAZA Homologycell partHOM03D000253
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000253

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001353Proteasome, subunit alpha/beta
IPR000426Proteasome alpha-subunit, N-terminal domain
IPR023332Proteasome A-type subunit

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.