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WorkbenchGene: CL01G09940 (Citrullus lanatus)
Overview 
- Gene Identifier
- CL01G09940
- Transcript Identifier
- CL01G09940.1
- Gene Type
- Coding gene
- Location
- Chr1 : 10768555-10777172 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
protein ligase SIS3
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| GeneName | Cla000970 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0010182 | ISO | PLAZA Integrative Orthology | sugar mediated signaling pathway | AT3G47990 |
| GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT3G47990 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein ligase activity | AT3G47990 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.