Gene: BV4G11840 (Beta vulgaris)

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Gene Identifier
BV4G11840
Transcript Identifier
BV4G11840.1
Gene Type
Coding gene
Location
Bvchr4.sca001 : 546629-553092 : negative

Family

Gene family
HOM03D000685
(203 genes in 30 species)
specific family
Subfamily
ORTHO03D002191
(43 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine)
Putative DNA (cytosine-5)-methyltransferase CMT1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameBv4_071750_ewph
pidBv4_071750_ewph.t1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010425IEAGenome ProjectDNA methylation on cytosine within a CNG sequence
GO:0006342IEAGenome Projectchromatin silencing
GO:0006333IEAGenome Projectchromatin assembly or disassembly
GO:0006351IEAGenome Projecttranscription, DNA-templated
GO:0051567IEAGenome Projecthistone H3-K9 methylation
GO:0006306IEAGenome ProjectDNA methylation
GO:0010069IEAGenome Projectzygote asymmetric cytokinesis in embryo sac
GO:0016568IEAGenome Projectchromatin modification
GO:0045814ISOPLAZA Integrative Orthologynegative regulation of gene expression, epigeneticAT1G69770
GO:0006304IEAPLAZA HomologyDNA modificationHOM03D000685
GO:0032259IEAPLAZA HomologymethylationHOM03D000685
GO:0006305IEAPLAZA HomologyDNA alkylationHOM03D000685
GO:0043414IEAPLAZA Homologymacromolecule methylationHOM03D000685
GO:0044728IEAPLAZA HomologyDNA methylation or demethylationHOM03D000685
GO:0040029IEAPLAZA Homologyregulation of gene expression, epigeneticHOM03D000685

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0008168IEAGenome Projectmethyltransferase activity
GO:0003682IEAGenome Projectchromatin binding
GO:0003886IEAGenome ProjectDNA (cytosine-5-)-methyltransferase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000785IEAGenome Projectchromatin

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001525C-5 cytosine methyltransferase
IPR018117DNA methylase, C-5 cytosine-specific, active site
IPR000953Chromo domain/shadow
IPR025821DNA (cytosine-5-)-methyltransferase, plant
IPR023780Chromo domain
IPR001025Bromo adjacent homology (BAH) domain
IPR016197Chromo domain-like
IPR023779Chromo domain, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.